Package: TapeS 0.14.1.9005

TapeS: Tree Taper Curves and Sorting Based on 'TapeR'

Providing new german-wide 'TapeR' Models and functions for their evaluation. Included are the most common tree species in Germany (Norway spruce, Scots pine, European larch, Douglas fir, Silver fir as well as European beech, Common/Sessile oak and Red oak). Many other species are mapped to them so that 36 tree species / groups can be processed. Single trees are defined by species code, one or multiple diameters in arbitrary measuring height and tree height. The functions then provide information on diameters along the stem, bark thickness, height of diameters, volume of the total or parts of the trunk and total and component above-ground biomass. It is also possible to calculate assortments from the taper curves. Uncertainty information is provided for diameter, volume and component biomass estimation.

Authors:Christian Vonderach [aut, cre], Edgar Kublin [aut], Gerald Kändler [aut]

# Install 'TapeS' in R:

install.packages('TapeS', repos = c('https://vochr.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://gitlab.com/vochr/tapes

Uses libs:

openblas– Optimized BLAS
c++– GNU Standard C++ Library v3

On CRAN:

openblas cpp

3.48 score 1 scripts 245 downloads 55 exports 6 dependencies

Last updated from:f1daccfc6d. Checks:13 WARNING, 2 OK. Indexed: yes.

Target	Result	Time
linux-devel-arm64	WARNING	112
linux-devel-x86_64	WARNING	156
source / vignettes	OK	186
linux-release-arm64	WARNING	101
linux-release-x86_64	WARNING	130
macos-release-arm64	WARNING	227
macos-release-x86_64	WARNING	342
macos-oldrel-arm64	WARNING	193
macos-oldrel-x86_64	WARNING	346
windows-devel-arm64	WARNING	373
windows-devel-x86_64	WARNING	160
windows-release-arm64	WARNING	337
windows-release-x86_64	WARNING	122
windows-oldrel-x86_64	WARNING	116
wasm-release	OK	108

Exports:Az BaMap bark bdat_as_tprtrees bgbiomass BGBvar Bhd biomass check_monotonicity D005 D03 D13 D7 Dbh Dm Dm<-E_HDxoR_HmDm_Ht.f Efm Efm_phys estHeight fnMultipleFixL FormTariff getTapeSoptions Hm Hm<-Ht Ht<-lmeSKEBLUP mono nfi_as_tprtrees nsur nsur2 parSort petterson seg_as_tprtrees setTapeSoptions sHt sHt<-simTrees spp spp<-tprAssortment tprBark tprBiomass tprDiameter tprDiameterCpp tprHeight tprSpeciesCode tprTrees tprVolume Vfm Vfm_phys VolE VolFAO VolR

Dependencies:lattice nlme pracma Rcpp RcppArmadillo TapeR

Extend TapeR by implementing sorting and related aspects of forestry in R

Rendered fromtapes.rmdusingknitr::rmarkdown

Last update: 2021-07-26
Started: 2020-05-18

Help page	Topics
estimate minimum cutting diameter	Az
function for mapping the 36 tree species to several internal functions	BaMap
Double Bark Thickness	bark
estimation of below-ground biomass (BGB)	bgbiomass
estimate variance components for below-ground biomass functions	BGBvar
Prediction of above-ground biomass according to NFI-functions	biomass
calculate VCOV-Matrix for volume segments	calcVCOVsekVol
generate and/or check validity of biomass function component names	check_Comp
monotonicity check for taper curve	check_monotonicity
coerce different data sources into class 'tprTrees'	bdat_as_tprtrees data_coercion nfi_as_tprtrees seg_as_tprtrees
Extract pre-defined diameter	Bhd D005 D03 D13 D7 Dbh
Find Height of diameter under bark via uniroot	E_HDxoR_HmDm_Ht.f HxoR_root.f
Estimate tree height by DBH according to BWI3	estHeight
optimise fixed length assortment with 2 or more possible assortment length	fnMultipleFixL
percentage of unusable coarse wood	fnUnvd
Tariff for taper form	FormTariff
returns coefficients for Pettersen-Height model	HtCoef
diameter prediction E[d] for TapeR-object	lmeSKEBLUP
Component biomass functions	nsur
Component biomass functions	nsur2
estimate variance components for component biomass functions	NSURvar
constructor for class parSort	parSort
An S4 class to represent the parameters for tree assorting.	parSort-class [,parSort,ANY,ANY,ANY-method [,parSort-method
height estimation	petterson
Plot taper curve for an object of class 'tprTrees'	plot.tprTrees
parameter of bark function	RiPar
Set and get options for the TapeS-package	getTapeSoptions setTapeSoptions
simulating objects of class 'tprTrees'	simTrees
slot accessor functions for class 'tprtrees'	Dm Dm,tprTrees-method Dm<- Dm<-,tprTrees-method Hm Hm,tprTrees-method Hm<- Hm<-,tprTrees-method Ht Ht,tprTrees-method Ht<- Ht<-,tprTrees-method mono mono,tprTrees-method sHt sHt,tprTrees-method sHt<- sHt<-,tprTrees-method Slot_accessors spp spp,tprTrees-method spp<- spp<-,tprTrees-method
Functions to calculate assortments for given tree	tprAssortment tprAssortment,tprTrees-method
Functions to calculate double bark thickness for given diameter at height 'Hx'	tprBark tprBark,tprTrees-method
total aboveground and component biomass	tprBiomass tprBiomass,tprTrees-method
Functions to extract diameters from Taper curve	tprDiameter tprDiameter,tprTrees-method
Function to extract diameters from Taper curve using Rcpp	tprDiameterCpp tprDiameterCpp,tprTrees-method
Estimate height for given diameter w/ or w/o bark	tprHeight tprHeight,tprTrees-method
Get BDAT species code or transform it to a name.	tprSpeciesCode
constructor for class tprTrees	tprTrees
An S4 class to represent one or multiple trees.	length,tprTrees-method show,tprTrees-method tprTrees-class [,tprTrees,ANY,ANY,ANY-method [,tprTrees-method
Functions to calculate stem volume from taper curve	tprVolume tprVolume,tprTrees-method
tree volume information	Efm Efm_phys Vfm Vfm_phys VolE VolFAO VolR

Package: TapeS 0.14.1.9005

TapeS: Tree Taper Curves and Sorting Based on 'TapeR'

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